Publication

2014

Original papers

• "Integrated Metabolic Flux and Omics Analysis of Synechocystis sp. PCC 6803 under Mixotrophic and Photoheterotrophic Conditions"
  Tsubasa Nakajima, Shuichi Kajihata, Katsunori Yoshikawa, Fumio Matsuda, Chikara Furusawa, Hiroshi Shimizu
  Plant and Cell Physiology 55, 9, 1605-1612 (2014).
• "Enhanced acetic acid and succinic acid production under microaerobic conditions by Corynabacterium glutamicum harboring Escherichia coli transhydrogenase gene pntAB"
  Yuto Yamauchi, Takashi Hiraswa, Msato Nishii, Chikara Furuasawa, Hiroshi Shimizu
  Journal of General and Applied Microbiology 60, 3, 112-118 (2014).
• "Reliable metabolic flux estimation in Escherichia coli central carbon metabolism using intracellular free amino acids"
  Nobuyuki Okahashi, Shuichi Kajihata, Chikara Furusawa, Hiroshi Shimizu
  Metabolites 30, 4(2), 408-420 (2014).
• "OpenMebius: An open source software for isotopically nonstationary 13C-based metabolic flux analysis"
  Shuichi Kajihata, Chikara Furusawa, Fumio Matsuda, Hiroshi Shimizu
  BioMed Research International, 627014 (2014).
• "Increased 3-hydroxypropionic acid production from glycerol, by modification of central metabolism in Escherichia coli Journal: Microbial Cell Factories"
  Kento Tokuyama, Satoshi Ohno, Katsunori Yoshikawa, Takashi Hirasawa, Shotaro Tanaka, Chikara Furusawa, Hiroshi Shimizu
  Microbial Cell Factories 7, 13, 64 (2014).
• "13C-Metabolic flux analysis in heterologous cellulase production by Bacillus subtilis genome-reduced strain"
  Yoshihiro Toya, Takashi Hirasawa, Takuya Morimoto, Kenta Masuda, Yasushi Kageyama, Katsuya Ozaki, Naotake Ogasawara, Hiroshi Shimizu
  Journal of Biotechnology 10, 179, 42-49 (2014).
• "Development of an automated culture system for laboratory evolution"
  Takaaki Horinouchi, Teruaki Minamoto, Shingo Suzuki, Hiroshi Shimizu, Chikara Furusawa
  Journal of Laborarory Automation 19, 5, 478-82 (2014).
• "FastPros: Screening of reaction knockout strategies for metabolic engineering"
  Satoshi Ohno, Hiroshi Shimizu, Chikara Furusawa
  Bioinformatics 30, 7, 981-7 (2014).
• "Addendum, Potential of a Saccharomyces cerevisiae recombinant strain lacking ethanol and glycerol biosynthesis pathways in efficient anaerobic bioproduction"
  Takashi Hirasawa, Yoshihiro Ida, Chikara Furusawa, Hiroshi Shimizu
  Bioengineered 5, 2, 123-128 (2014).
• "Metabolic engineering of Saccharomyces cerevisiae for improving succinic acid production based on metabolic profiling"
  Yuma Ito, Takashi Hirasawa, Hiroshi Shimizu
  Bioscience, Biotechnology, and Biochemistry 78, 1, 151-9 (2014).

Review papers

• "代謝シミュレーションによる細胞内代謝のデザインと工学的応用"
  松田 史生, 吉川 勝徳, 清水 浩
  生物工学会誌 92, 11, 593-597 (2014).

Books

• "Chapter 17 Glutamic Acid"
  Takashi Hirasawa, Hiroshi Shimizu
  Bioprocessing of Renewable Resources to Commodity Bioproducts (Weiley), 473-495 (2014).